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A -- Bacterial Population Genetics in a Forensics Context (BPGFC)
Program Summary
Title: A -- Bacterial Population Genetics in a Forensics Context (BPGFC)
GovCB Opps ID : ADP12086006950001154
Document Type: Modification/Amendment/Cancel (Modified)
FSC Code: A - Research and development
Solicitation No.: BAA08-04
Source: https://www.fbo.gov/?s=opportunity&mode=form&id=ea738a6ed0e73a05596396e8aafb9e01&tab=cor...
Posted Date:
Apr 18, 2008
Last Update: Jul 09, 2008
Due Date: Jun 30, 2008

Description
A -- Bacterial Population Genetics in a Forensics Context (BPGFC)
Solicitation Number: BAA08-04
Agency: Department of Homeland Security
Office: Office of the Chief Procurement Officer
Location: Office of Procurement Operations
Opportunity History
Solicitation Number:
BAA08-04
Notice Type:
Modification/Amendment/Cancel
Synopsis:
Added: March 12, 2008 Modified: Apr 18, 2008 9:12 amTrack Changes
The goal of this DHS Science & Technology research program is to develop algorithms and/or analytical tools that will assist investigators of bioterrorism events by providing precision and statistical power to inferences concerning the degree of relatedness among organisms or samples used in a bioterrorist event. The focus of this effort will be on research in the areas microbial ecology, population dynamics, host-pathogen interaction. genetic stability, statistical inference, and match criteria for the following select agents: Bacillus anthracis, Yersinia pestis, Clostridium botulinum, Francisella tularensis, Brucella sp., Escherichia coli O157:H7, Burkholderia mallei, Burkholderia pseudomallei. The objectives include:
1. Improving our understanding of the population genetics of these pathogens to include research on genome stability, host preferences and interactions, genetic mobility of virulence factors, polymorphic sites, mutational hot spots, geographical distribution, microbial ecology, pathogen lifecycles, natural reservoirs, effects of host - pathogen interaction, etc.
2. Improving methods for determining rates of mutation and recombination of the pathogen genomes and the identification of adaptive mutations that can have forensic utility
3. Establishing match criteria for discriminating "difference" or "sameness" in sample comparisons. Define the parameters for inclusion or exclusion in the context of a known sample and questioned sample. This must be backed by statistical parameters for acceptance or rejection of the null hypothesis
4. Developing efficient, economical, and statistically rigorous sampling strategies to acquire spatially referenced genetic information on reservoirs of these pathogens
5. Developing bioinformatics-based analytical tools for supporting hypotheses testing regarding pathogen origin that go beyond current phylogeny-based inferential methods and can meet forensic (legal) admissibility requirements of relevance and reliability.

Multiple awards are anticipated under this BAA. This BAA has a registration process -- please see Section IV of the BAA. Prospective Offerors must ensure that they allow sufficient time to complete the registration and submission process.
Modification 1
Sensitive/Secure Package:
no
Type:
Mod/Amendment
Posted Date:
April 18, 2008
Description: White papers deadline extended to 19 May 2008 (originally due 18 April 2008). Full proposals deadline extended to 30 June 2008 (originally due 30 May 2008). Please refer to yellow highlighted portions of .pdf attachment to see amendments to BAA.
Contracting Office Address:
Department of Homeland Security, Office of the Chief Procurement Officer, Office of Procurement Operations, Office of the Chief Procurement Officer, Washington, DC, 20528, UNITED STATES
Primary Point of Contact.:
Timothy L Davis,
Contracting Officer
Phone: 202-254-5676
Fax: 202-254-6167
Point of Contact(s):
Timothy Davis, Contracting Officer, Phone 202-254-5676, Fax 202-254-6167, Email timothy.davis@hq.dhs.gov
All Files
General Information
Notice Type:
Modification/Amendment/Cancel
Original Posted Date:
April 18, 2008
Posted Date:
April 18, 2008
Response Date:
June 30, 2008
Original Response Date:
June 30, 2008
Archiving Policy:
Automatic, on specified date
Original Archive Date:
July 14, 2008
Archive Date:
July 14, 2008
Classification Code:
A -- Research & Development
NAICS Code:
541 -- Professional, Scientific, and Technical Services/541712 -- Research and Development in the Physical, Engineering, and Life Sciences (except Biotechnology)




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